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ncbi-datasets-mcp

io.github.mrfentmen/ncbi-datasets-mcp v1.0.1

Official Registry search git

Repository

NCBI Datasets: genome assemblies by taxon, gene records by symbol and taxonomy lookups

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Install connect locally via stdio

Run in your terminal

claude mcp add ncbi-datasets-mcp -- npx -y @mrfentmen/ncbi-datasets-mcp

Add to claude_desktop_config.json

{
  "mcpServers": {
    "ncbi-datasets-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/ncbi-datasets-mcp"
      ]
    }
  }
}

Add to ~/.cursor/mcp.json

{
  "mcpServers": {
    "ncbi-datasets-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/ncbi-datasets-mcp"
      ]
    }
  }
}

Add to Cursor →

Add to ~/.codeium/windsurf/mcp_config.json

{
  "mcpServers": {
    "ncbi-datasets-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/ncbi-datasets-mcp"
      ]
    }
  }
}

Add to .vscode/mcp.json

{
  "servers": {
    "ncbi-datasets-mcp": {
      "type": "stdio",
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/ncbi-datasets-mcp"
      ]
    }
  }
}

Add to VS Code →

Add to cline_mcp_settings.json

{
  "mcpServers": {
    "ncbi-datasets-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "@mrfentmen/ncbi-datasets-mcp"
      ]
    }
  }
}

Packages

npm @mrfentmen/ncbi-datasets-mcp@1.0.1

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